Research Catalog

Details

Additional authors

1. Kihara, Daisuke

Description

1. xii, 358 pages : illustrations (some color); 26 cm.

Series statement

1. Methods in molecular biology, 1064-3745 ; 2165
2. Springer protocols

Uniform title

1. Protein structure prediction (Humana Press)
2. Methods in molecular biology (Clifton, N.J.) ; v. 2165.
3. Springer protocols (Series)

Subject

1. Proteins > Structure > Mathematical models
2. Amino acid sequence
3. Proteins > Conformation
4. Probabilities
5. Protein Conformation
6. Models, Molecular
7. Probability
8. Amino Acid Sequence
9. probability
10. Proteins > Conformation
11. Probabilities
12. Amino acid sequence
13. Proteins > Structure > Mathematical models

Contents

1. Structural modeling and ligand-binding prediction for analysis of structure-unknown and function-unknown proteins using FORTE alignment and PoSSuM pocket search -- The MULTICOM protein structure prediction server empowered by deep learning and contact distance prediction -- The Genome3D Consortium for structural annotations of selected model organisms -- Estimating the quality of 3D protein models using the ModFOLD7 server -- Prediction of intrinsic disorder with quality assessment using QUARTER -- Modeling of three-dimensional RNA structures using SimRNA -- Modeling protein homo-oligomer structures with GalaxyHomomer web server -- Template-based modeling of protein complexes using the PPI3D web server -- Protein-protein and protein-peptide docking with ClusPro server -- Modeling of protein complexes and molecular assemblies with pyDock -- A guide for protein-protein docking using SwarmDock -- Modeling protein-protein or protein-DNA/RNA complexes using the HDOCK webserver -- IDP-LZerD: software for modeling disordered protein interactions -- AnAnaS: software for analytical analysis of symmetries in protein structures -- MDockPeP: a web server for blind prediction of protein-peptide complex structures -- Protocols for all-atom reconstruction and high-resolution refinement of protein-peptide complex structures -- Dockground tool for development and benchmarking of protein docking procedures -- Molecular dynamics flexible fitting: all you want to know about resolution exchange -- Protein structure modeling from Cryo-EM map Using MAINMAST and MAINMAST-GUI plugin -- Protocols for fast simulations of protein structure flexibility using CABS-Flex and SURPASS.

Owning institution

1. Princeton University Library

Bibliography (note)

1. Includes bibliographical references and index.

Additional formats (note)

1. Also published electronically.

Terms of use (note)

1. Current copyright fee: GBP19.00